TrinityMetrics

Site: https://iamstein.github.io/TrinityMetrics/

A repository and publishing site focused on integrating human expertise, generative AI, and regulated clinical data workflows for statistical and pharmacometric analysis.

Purpose

TrinityMetrics explores how AI can be used in clinical, statistical, and pharmacometric work without weakening accountability, reproducibility, or data integrity.

The repository is designed to support two connected goals:

• a Quarto website/blog for public-facing writing
• a code repository for reusable materials, examples, and workflow assets

Site structure

The Quarto site is organized around a small set of stable pages:

• Home for project framing and current direction
• Blog for essays, working positions, and implementation notes
• Projects for open-source tools and longer-running working documents
• Guides for working practices, such as how to read a paper
• Resources for reference documents, checklists, and practical guides
• Code for repository layout, examples, and reusable materials
• About for the bio, audience, and project status, with the CV linked beside it

Repository layout

.
├─ _quarto.yml
├─ index.qmd
├─ about.qmd
├─ code.qmd
├─ blog/
│  ├─ index.qmd
│  ├─ drafts/
│  └─ posts/
├─ projects/
│  ├─ index.qmd
│  ├─ projects.yml
│  └─ <project>/
├─ guides/
│  ├─ index.qmd
│  └─ guides.yml
├─ code/
├─ data/
├─ examples/
├─ skills/
├─ references/
├─ .github/workflows/
├─ styles.css
└─ docs/

Key directories

• blog/drafts/ contains working Markdown drafts that are not yet published
• blog/posts/ contains published Quarto posts
• projects/ contains one directory per project, listed by projects/projects.yml
• guides/ contains working-practice guides, listed by guides/guides.yml
• data/ contains datasets used by posts and examples
• code/ contains reusable scripts, templates, and utilities
• examples/ contains worked examples and case studies
• skills/ contains specialized AI guidance/context files
• references/ contains PDFs and other static support materials
• docs/ contains the rendered site output for GitHub Pages

Local development

To preview the site locally:

quarto preview

To render the site into docs/:

quarto render

GitHub Pages publishing

The site is configured to render to docs/.

.github/workflows/publish.yml renders the site and deploys it on every push to main. That workflow also fetches the CV from Google Docs into docs/files/stein-cv.pdf at build time, so the published PDF matches the document as of the last build. The document must stay shared as anyone with the link, Viewer for the fetch to work.

Notes

• The Quarto configuration lives in _quarto.yml.
• Site styling adjustments live in styles.css.
• The repository is intentionally early-stage and will evolve as posts, examples, and reusable materials are added.