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Proper GSEA for multi-gene orthogroups/families

Status: Open.

#827 In YuLab-SMU/clusterProfiler;

· desmodus1984 opened on Sep 9, 2026

enrichKEGG报错，无法连接使用

Status: Open.

#825 In YuLab-SMU/clusterProfiler;

· liujinkun007-alt opened on Aug 8, 2026

groupGO函数运行失败

Status: Open.

#815 In YuLab-SMU/clusterProfiler;

· jiangzhichao47-create opened on Apr 3, 2026

Has this plot been removed in the latest version of the R package?

Status: Open.

#799 In YuLab-SMU/clusterProfiler;

· JWDu0122 opened on Dec 9, 2025

cex_label_gene not working on v4.14.0

Status: Open.

#794 In YuLab-SMU/clusterProfiler;

· jacobHog opened on Dec 4, 2025

Why does enrichKEGG() output include Category / Subcategory, but in my case gseKEGG() does not?

Status: Open.

#787 In YuLab-SMU/clusterProfiler;

· laleoarrow opened on Oct 8, 2025

4.16 bioconductor-clusterprofiler NOT available in https://anaconda.org/

Status: Open.

#784 In YuLab-SMU/clusterProfiler;

· ray1919 opened on Aug 27, 2025

Why doesn’t enrichKEGG() support the readable = TRUE parameter like enrichGO()?

Status: Open.

#782 In YuLab-SMU/clusterProfiler;

· Wang-Ande opened on Jul 22, 2025

enrichGO results not filtered by default pvalueCutoff

Status: Open.

#777 In YuLab-SMU/clusterProfiler;

· jtourig opened on Jun 25, 2025

Color scales in the new version cannot be easily manipulated

Status: Open.

#773 In YuLab-SMU/clusterProfiler;

· zuzkamat opened on May 16, 2025

cannot return enrichKEGG results with compareCluster

Status: Open.

#770 In YuLab-SMU/clusterProfiler;

· kristina-sakers opened on May 8, 2025

Cannot insert dotplot SVGs into Word or PowerPoint for macOS

Status: Open.

#769 In YuLab-SMU/clusterProfiler;

· nehawali21 opened on May 5, 2025