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@MathOnco

IMO

Moffitt Cancer Center's Integrated Mathematical Oncology public facing repositories for published projects.

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  1. HAL HAL Public

    HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs

    Java 38 13

  2. NeoPredPipe NeoPredPipe Public

    Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

    Python 118 32

  3. EvoFreq EvoFreq Public

    Evolutionary frequency visualization tool of temporal data

    R 24 3

  4. Newsletter-Bibliography Newsletter-Bibliography Public

    LaTeX bibliography of the "This week in Math Onco" newsletter (https://mathematical-oncology.org/newsletter)

    TeX 2

Repositories

Showing 10 of 53 repositories
  • Newsletter-Bibliography Public

    LaTeX bibliography of the "This week in Math Onco" newsletter (https://mathematical-oncology.org/newsletter)

    MathOnco/Newsletter-Bibliography's past year of commit activity
    TeX 2 0 0 0 Updated Aug 12, 2026
  • AI-curation-mathonco Public

    Codebase and data for bibliometric analysis on Mathematical Research in Oncology

    MathOnco/AI-curation-mathonco's past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 31, 2026
  • LungTissueDensityModel Public

    Population-based model of NSCLC initiation and progression associated with manuscript.

    MathOnco/LungTissueDensityModel's past year of commit activity
    Java 0 MIT 0 0 0 Updated Jun 18, 2026
  • Mathematical-Biomarkers Public

    Code repository for the paper 'Mathematical Biomarkers of Adaptive Therapy Outcomes in Prostate Cancer'

    MathOnco/Mathematical-Biomarkers's past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated May 20, 2026
  • IMAT Public

    IMO Methods & Tools Lecture Series

    MathOnco/IMAT's past year of commit activity
    9 0 0 0 Updated May 15, 2026
  • Evolutionary-Antifragile-Therapy Public

    Evolutionary Antifragile Therapy project

    MathOnco/Evolutionary-Antifragile-Therapy's past year of commit activity
    MATLAB 2 0 0 0 Updated Mar 27, 2026
  • Valis-GUI Public

    GUI to help handle the Valis imaging process (alternative to using command line/terminal).

    MathOnco/Valis-GUI's past year of commit activity
    Python 1 2 0 0 Updated Jan 23, 2026
  • OncoLens Public

    A modeling and visualization application tool used for biological data research, analysis and prediction.

    MathOnco/OncoLens's past year of commit activity
    Python 1 MIT 1 0 0 Updated Jan 23, 2026
  • Contact-Inhibition Public

    Repository for the manuscript "Universal principles of cell population growth follow from local contact inhibition"

    MathOnco/Contact-Inhibition's past year of commit activity
    Wolfram Language 0 0 0 0 Updated Jan 22, 2026
  • ER-breast-cancer-evolutionary-double-bind Public

    Repository for code & data for "A novel combination therapy for ER+ breast cancer suppresses drug resistance via an evolutionary double-bind"

    MathOnco/ER-breast-cancer-evolutionary-double-bind's past year of commit activity
    MATLAB 0 0 0 0 Updated Jan 7, 2026
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